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Domain-Domain-Interaction of RNA_pol_L and RNA_pol_Rpb8

Topologies observed in interactions between these two domains (hide)

# Cases Topology HMM profile interface residues in RNA_pol_L HMM profile interface residues in RNA_pol_Rpb8
43 0 : 0
residues 33-33 of RNA_pol_L are in the interface residues 35-36 of RNA_pol_L are in the interface residues 39-39 of RNA_pol_L are in the interface
residues 13-13 of RNA_pol_Rpb8 are in the interface residues 15-16 of RNA_pol_Rpb8 are in the interface residues 38-39 of RNA_pol_Rpb8 are in the interface residues 41-41 of RNA_pol_Rpb8 are in the interface
11 2 : 1
residues 24-27 of RNA_pol_L are in the interface residues 58-61 of RNA_pol_L are in the interface
residues 63-63 of RNA_pol_Rpb8 are in the interface residues 65-67 of RNA_pol_Rpb8 are in the interface residues 69-69 of RNA_pol_Rpb8 are in the interface
1 1 : 0
residues 13-13 of RNA_pol_Rpb8 are in the interface residues 15-16 of RNA_pol_Rpb8 are in the interface residues 38-39 of RNA_pol_Rpb8 are in the interface residues 41-41 of RNA_pol_Rpb8 are in the interface
1 3 : 0
residues 13-13 of RNA_pol_Rpb8 are in the interface residues 15-16 of RNA_pol_Rpb8 are in the interface residues 38-39 of RNA_pol_Rpb8 are in the interface residues 41-41 of RNA_pol_Rpb8 are in the interface

GO terms associated with both domains participating in this interaction
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This interaction has been found in the following PDB entries:

Sorting Order: by Z-score by topology lexicographically (by PDB)
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PDB ID chain 1 residues chain 2 residues score Z-score Topology more
information		 Visualization
3h0g O17-261 T8-125 5.48 3.26505 3 : 0 3h0g
3h0g C17-261 H8-125 5.48 3.09451 1 : 0 3h0g
2r93 C18-259 H7-146 3.62 2.9289 0 : 0 2r93
2ja6 C18-259 H7-146 3.62 2.63442 0 : 0 2ja6
2r92 C18-259 H7-146 3.49 2.61651 0 : 0 2r92
1y77 C18-259 H7-146 2.83 2.47877 0 : 0 1y77
2e2i C18-259 H7-146 2.68 2.47196 0 : 0 2e2i
1i6h C18-259 H7-146 3.66 2.46609 0 : 0 1i6h
3i4n C18-259 H7-146 2.68 2.44564 0 : 0 3i4n
3gtp K31-103 H7-146 2.8 2.44343 2 : 1 3gtp