3did - Results

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Domain DNA_pol_A (Pfam: PF00476.25

)

GO terms

F	GO:0003677	DNA binding

F	GO:0003887	DNA-directed DNA polymerase activity

P	GO:0006260	DNA replication

Default colors
Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

Default color scheme

Interacting domains (11 domains)

5_3_exonuc

5_3_exonuc_N

DNA_polI_exo1

DNA_pol_A

DNA_pol_A_exo1

DNA_pol_P_Exo

DNApol_Exo

DnaB_C

Taq-exonuc

Thioredoxin

V-set

HMM profile interface residues in DNA_pol_A (26 interfaces)

HMM prof. interface res.	Binding partner(s)
	5_3_exonuc
	DNA_pol_A
	V-set
	Thioredoxin
	5_3_exonuc_N
	Thioredoxin
	DNA_pol_A
	DNA_polI_exo1 DNA_pol_A_exo1 DNA_pol_P_Exo Taq-exonuc
	DNA_pol_A
	DNApol_Exo DNA_polI_exo1
	DNA_pol_A
	DNA_pol_A_exo1
	DNA_pol_A_exo1
	DNA_pol_A_exo1
	DNApol_Exo
	DNA_pol_A
	DNA_pol_A
	DnaB_C
	DNA_pol_A
	DNA_pol_A
	5_3_exonuc
	5_3_exonuc_N DNA_pol_A
	DNA_polI_exo1 Taq-exonuc
	DnaB_C
	DNA_pol_A_exo1
	DNA_pol_A

PDB entries that contain the DNA_pol_A domain (297 structures)

PDB	Chains	3did
1bgx	T
1cmw	A
1d8y	A
1d9d	A
1d9f	A
1jxe	A
1kfd	A
1kfs	A
1kln	A
1krp	A
1ksp	A
1ktq	A
1l3s	A
1l3t	A
1l3u	A
1l3v	A
1l5u	A
1lv5	A, B
1njw	A
1njx	A
1njy	A
1njz	A
1nk0	A
1nk4	A
1nk5	A
1nk6	A
1nk7	A
1nk8	A
1nk9	A
1nkb	A
1nkc	A
1nke	A
1qsl	A
1qss	A
1qsy	A
1qtm	A
1skr	A
1sks	A
1skw	A
1sl0	A, C
1sl1	A
1sl2	A
1t7p	A
1t8e	A
1taq	A
1tau	A
1tk0	A
1tk5	A
1tk8	A
1tkd	A
1u45	A
1u47	A
1u48	A
1u49	A
1u4b	A
1ua0	A
1ua1	A
1x9m	A
1x9s	A
1x9w	A
1xc9	A
1xwl	A
1zyq	A
2ajq	A, F
2bdp	A
2hhq	A
2hhs	A
2hht	A
2hhu	A
2hhv	A
2hhw	A, D
2hhx	A
2hvh	A, D
2hvi	A, D
2hw3	A
2kfn	A
2kfz	A
2ktq	A
2kzm	A
2kzz	A
2xo7	A
2xy5	A
2xy6	A
2xy7	A
2y1i	A
2y1j	A
3bdp	A
3eyz	A
3ez5	A, D
3hp6	A, D
3hpo	A
3ht3	A, D
3ikm	A, D
3ktq	A
3lwl	A
3lwm	A
3m8r	A
3m8s	A
3ojs	A

PDB	Chains	3did
3oju	A
3po4	A
3po5	A
3pv8	A, D
3px0	A, D
3px4	A, D
3px6	A, D
3py8	A
3rr7	A
3rr8	A
3rrg	A
3rrh	A
3rtv	A
3sv3	A
3sv4	A
3syz	A
3sz2	A
3t3f	A
3tan	A
3tap	A
3taq	A
3tar	A
3thv	A, D
3ti0	A, D
4b9l	A
4b9m	A
4b9n	A
4b9s	A
4b9t	A
4b9u	A
4b9v	A
4bdp	A
4bwj	A
4bwm	A
4c8k	A
4c8l	A
4c8m	A
4c8n	A
4c8o	A
4cch	A
4df4	A
4df8	A
4dfj	A
4dfk	A
4dfm	A
4dfp	A
4dle	A
4dlg	A
4dqi	A, D
4dqp	A, D
4dqq	A, D
4dqr	A, D
4dqs	A
4ds4	A, D
4ds5	A, D
4dse	A, D
4dsf	A, D
4dsi	A
4dsj	A, B
4dsk	A
4dsl	A
4dwi	A
4e0d	A
4elt	A
4elu	A
4elv	A
4ez6	A, D
4ez9	A, D
4f2r	A, D
4f2s	A, D
4f3o	A, D
4f4k	A, D
4f8r	A, D
4ktq	A
4n56	A
4n5s	A
4o0i	A
4uqg	A
4x0p	A, B, C, D
4x0q	A, B
4xiu	A
4xvi	A
4xvk	A
4xvl	A
4xvm	A
4yfu	A, D
4ztu	A
4ztz	A
5c51	A
5c52	A
5c53	A
5dkt	A
5dku	A, B
5e41	A
5ikn	A, B, C
5ktq	A
5nkl	A
5o7t	A
5oxj	A

PDB	Chains	3did
5szt	A
5w6k	A
5w6q	A, C, G
5ytc	A
5ytd	A
5yte	A
5ytf	A
5ytg	A
5yth	A
5z3n	A
6dsu	A
6dsv	A
6dsw	A
6dsx	A
6dsy	A
6fbc	A
6fbd	A
6fbe	A
6fbf	A
6fbg	A
6fbh	A
6fbi	A
6mu4	A
6mu5	A
6n7w	H
6n9u	H
6n9v	H
6n9w	H
6n9x	H
6p5c	A
6p7e	A, B, C, D
6q4u	A
6q4v	A
6ueu	A, D
6ur2	A
6ur4	A
6ur9	A, D
6us5	A, D
6vdc	A
6vdd	A, D
6vde	A, B
6xbu	A
7k5o	A
7k5p	A
7k5q	A
7k5r	A
7k5s	A
7k5t	A
7k5u	A
7owf	A
7pbk	A, B
7r0k	A, B
7sxl	A, B
7sxq	A, B
8d33	A
8d37	A
8d3r	A
8d42	A
8e23	A, D
8e24	A, D
8ef9	A
8efc	A
8efk	A
8g5i	A
8g5j	A
8g5k	A
8g5l	A
8g5m	A
8g5n	A
8g5o	A
8g5p	A
8gd7	A
8jrb	A, B
8oo6	A
8ooy	A
8scg	A, D
8sci	A, D
8scj	A, D
8sck	A, D
8scl	A, D
8scm	A, D
8scn	A, D
8sco	A, D
8scp	A, D
8scq	A, D
8scr	A, D
8scs	A, D
8sct	A, D
8scu	A, D
8t7e	A
8udk	A
8udl	A
8v54	A
8v55	A
8v5d	A
8v5r	A
8xjr	A
8xk7	A
9cay	A