3did - Results

Home Search Browse Download References Statistics Help About

Domain EXOSC1 (Pfam: PF10447.14

)

GO terms

F	GO:0003723	RNA binding

C	GO:0000178	Exosome (RNase complex)

Default colors
Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

Default color scheme

Interacting domains (5 domains)

DEAD

EXOSC1

RNase_PH

RRP40_S1

RRP4_S1

Interacting motifs (2 motifs)

EXOSC1_LIG_0-0

EXOSC1_LIG_2-0

HMM profile interface residues in EXOSC1 (12 interfaces)

HMM prof. interface res.	Binding partner(s)
	RNase_PH
	EXOSC1
	EXOSC1 RNase_PH
	RRP4_S1
	EXOSC1_LIG_2-0
	RNase_PH
	RNase_PH
	RRP40_S1
	RNase_PH
	EXOSC1_LIG_0-0 RNase_PH
	RNase_PH RRP40_S1
	DEAD

PDB entries that contain the EXOSC1 domain (20 structures)

PDB	Chains	3did
2ba1	A, B, C
2nn6	I
3m7n	A, B, C
3m85	A, B, C
4ifd	I
4oo1	I
5c0w	I
5c0x	I
5g06	I
5jea	I

PDB	Chains	3did
5k36	I
5okz	c, I, m, S
5vzj	I
6d6q	I
6d6r	I
8pel	I
8qcf	J
8r1o	I
9g8n	J
9g8p	J