3did - Results

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Domain Ephrin_lbd (Pfam: PF01404.24

)

GO terms

F	GO:0005515	Protein binding

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Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

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Interacting domains (6 domains)

Ephrin

Ephrin_lbd

Herpes_glycop_H

Herpes_glycop_H

Phage_glycop_gL

Phage_glycop_gL

V-set

fn3

Interacting motifs (1 motif)

Ephrin_lbd_LIG_1-0

Ephrin_lbd_LIG_1-0

HMM profile interface residues in Ephrin_lbd (15 interfaces)

HMM prof. interface res.	Binding partner(s)
	Ephrin_lbd Phage_glycop_gL
	Ephrin Ephrin_lbd V-set
	Ephrin_lbd
	Herpes_glycop_H
	Ephrin_lbd fn3
	Ephrin_lbd Ephrin_lbd_LIG_1-0
	V-set
	Ephrin_lbd
	Ephrin V-set
	Ephrin_lbd
	Ephrin Ephrin_lbd
	Ephrin_lbd
	Ephrin_lbd Herpes_glycop_H
	Ephrin_lbd
	Ephrin

PDB entries that contain the Ephrin_lbd domain (51 structures)

PDB	Chains	3did
1kgy	A, B, C, D
1nuk	A
1shw	B
2bba	A
2hle	A
2lw8	A
2qbx	A, B
2wo1	A, B
2wo2	A
2wo3	A
2x10	A
2x11	A
3c8x	A
3ckh	A, B
3czu	A
3etp	A
3fl7	A

PDB	Chains	3did
3gxu	A
3hei	A, C, E, G,...
3hpn	A, B, C, D,...
3mbw	A
3mx0	A, C
3nru	A, B, C, D,...
3p1i	A, B, C
3skj	E, F
4bk4	A, B
4bk5	A
4bka	A
4bkf	A, B
4et7	A
4l0p	A
4m4p	A
4m4r	A, C, E, G
4w4z	A, B, C, D

PDB	Chains	3did
4w50	A, B, C, D
5jr2	A, B, C, D
6b9l	A, B, C, D
6njz	A, B
6nk0	A, B
6nk1	A, B
6nk2	A, B
6nkp	A, B
6rw2	A
7b7n	E
7cze	I, J, K, L
7czf	A, D
7k7j	A
7ofv	A
7s7k	A
8trv	A, B
8tv1	C