3did - Results

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Domain GFP (Pfam: PF01353.27

)

GO terms

P	GO:0008218	Bioluminescence

Default colors
Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

Default color scheme

Interacting domains (33 domains)

HMM profile interface residues in GFP (63 interfaces)

HMM prof. interface res.	Binding partner(s)
	GFP
	GFP
	GFP P53_tetramer V-set
	GFP
	GFP V-set
	GFP
	GFP
	Ank
	GFP
	EF-hand_7 P53_tetramer
	Ank_2 GFP
	GFP V-set
	GFP OpuAC
	GFP V-set VKOR
	GFP
	GFP OpuAC
	GFP
	cNMP_binding SBP_bac_1
	GFP
	GFP
	V-set
	GFP Monellin
	Ank_2 APOBEC3 EF-hand_5 GFP
	EcoR124_C GFP
	GFP
	Ank_4 CoV_M
	Abhydrolase_1 EF-hand_7 Endonuclease_NS HEAT_2 HEAT_PBS
	GFP
	Cystatin MYO6_lever
	Ank_5 EcoR124_C GFP
	GFP V-set
	Ank_5 GFP
	Ank Ank_2 Ank_4 GFP HEAT_PBS
	GFP
	TetR_C_13
	OpuAC SBP_bac_8
	GFP
	GFP SBP_bac_1
	GFP V-set
	GFP
	Bcl-2 GFP
	EF-hand_7 GFP HEAT_2 V-set zf-WRNIP1_ubi Zn-C2H2_12
	GFP
	GFP V-set
	GFP UBM
	P53_tetramer V-set
	Abhydrolase_1 GFP V-set
	GFP
	HEAT HEAT_2 Zn-C2H2_12
	Ank_5 GFP SBP_bac_1
	EF-hand_7
	EF-hand_7 P53_tetramer
	Bcl-2 GFP
	Bcl-2 GFP TPM_phosphatase V-set
	GFP
	ubiquitin V-set
	GFP
	GFP
	Clp_N GFP
	GFP
	GFP
	GFP
	GFP

PDB entries that contain the GFP domain (976 structures)

PDB	Chains	3did
1b9c	A, B, C, D
1bfp	A
1c4f	A
1cv7	A
1ema	A
1emb	A
1emc	A, B, C, D
1eme	A
1emf	A
1emg	A
1emk	A
1eml	A
1emm	A
1f09	A
1f0b	A
1g7k	A, B, C, D
1gfl	A, B
1ggx	A, B, C, D
1h6r	A, B, C
1hcj	A, B, C, D
1huy	A
1jby	A
1jbz	A
1jc0	A, B, C
1jc1	A, B, C
1kp5	A, B
1kyp	A
1kyr	A
1kys	A
1mou	A
1mov	A
1myw	A
1oxd	A
1oxe	A
1oxf	A
1q4a	A
1q4b	A
1q4c	A
1q4d	A
1q4e	A
1q73	A
1qxt	A
1qy3	A
1qyf	A
1qyo	A
1qyq	A
1rm9	A
1rmm	A
1rmo	A
1rmp	A
1rrx	A
1s6z	A
1uis	A, B
1w7s	A, B, C, D
1w7t	A, B, C, D
1w7u	A, B, C, D
1xa9	A
1xae	A, B
1xmz	A, B, C, D
1xqm	A
1xss	A, B
1yfp	A, B
1yhg	A, B
1yhh	A
1yhi	A
1yj2	A
1yjf	A
1yzw	A, B, C, D
1z1p	A
1z1q	A
1zgo	A, B, C, D
1zgp	A, B, C, D
1zgq	A, B, C, D,...
1zux	A, B, C, D
2a46	A
2a47	A
2a48	A
2a50	A, B, C, D
2a52	A, B, C, D
2a53	A, B, C, D
2a54	A, B, C, D
2a56	A, B, C, D
2ah8	A, B
2aha	A, B
2arl	A
2awj	A
2awk	A
2awl	A
2awm	A
2b3p	A
2b3q	A, B, C, D
2btj	A, B, C, D
2c9i	A, B, C, D,...
2c9j	A, B, C, D,...
2ddc	A, B
2ddd	A, B
2due	A
2duf	A
2dug	A
2duh	A
2dui	A
2emd	A
2emn	A
2emo	A
2fl1	A, B, C, D
2fwq	A
2fzu	A
2g3o	A, B, C, D,...
2g6e	A
2g6x	A, B, C, D
2g6y	A, B, C, D
2gw3	A, B
2gw4	A, B, C, D
2gx0	A, B, C, D
2gx2	A, B, C, D,...
2h5o	A, B
2h5p	A
2h5q	A
2h5r	A
2h6v	A
2h8q	A, B, C, D
2h9w	A
2hcg	A
2hfc	A
2hgd	A
2hgy	A
2hjo	A
2hqk	A
2hqz	A
2hrs	A
2ib5	A, B, C, D,...
2ib6	A, B, C, D,...
2icr	A, B, C, D
2ie2	A, B, C, D,...
2iov	A, B, C, D
2jad	A
2o24	A
2o29	A
2o2b	A
2ogr	A, B, C, D
2ojk	A, B
2okw	A, B, C, D,...
2oky	A, B
2otb	A, B
2ote	A, B
2p4m	A, B, C, D,...
2pox	A, B, C, D
2pxs	A, B
2pxw	A, B
2q57	A
2q6p	A
2qle	A, B, C, D
2qlg	A, B
2qlh	A, B
2qli	A, B
2qrf	A
2qt2	A
2qu1	A
2qz0	A
2rh7	A, B, C, D
2v4e	A, B, C, D,...
2vad	A
2vae	A, B, C, D,...
2vvh	A, B, C, D
2vvi	A, B, C, D
2vvj	A, B, C, D
2vzx	A, B, C, D,...
2whs	A, B, C, D
2wht	A, B, C, D
2whu	A, B, C, D
2wiq	A, B
2wis	A, B
2wsn	A
2wso	A
2wur	A
2y0g	A
2ydz	A
2ye0	A
2ye1	A
2yfp	A
2z1o	A, B, C, D
2z6x	A, B, C, D,...
2z6y	A, B, C, D
2z6z	A, B, C, D,...
2zmu	A
2zmw	A, B, C, D
2zo6	A
2zo7	A
3a8s	A, B
3adf	A, B
3ai4	A
3ai5	A
3ako	A, C, E, G
3bx9	A, B
3bxa	A, B
3bxb	A, B, C, D,...
3bxc	A, B, C, D,...
3cb9	A
3cbe	A
3cd1	A
3cd9	A
3cfa	A, B, G, H,...
3cff	A, B, G, H,...
3cfh	A, B, G, H,...
3cgl	A, B, C, D,...
3dpw	A
3dpx	A
3dpz	A
3dq1	A
3dq2	A
3dq3	A
3dq4	A
3dq5	A
3dq6	A
3dq7	A
3dq8	A
3dq9	A
3dqa	A
3dqc	A
3dqd	A
3dqe	A
3dqf	A
3dqh	A
3dqi	A
3dqj	A
3dqk	A
3dql	A
3dqm	A
3dqn	A
3dqo	A
3dqu	A
3e5t	A
3e5v	A
3e5w	A, B, C, D
3ed8	A, B, C, D,...
3ek4	A
3ek7	A
3ek8	A
3ekh	A
3ekj	A
3evp	A
3evr	A
3evu	A
3evv	A
3g9a	A
3gb3	A, B
3gex	A
3gj1	A, B, C, D
3gj2	A, B, C, D
3gl4	A, B
3h1o	A, B
3h1r	A
3i19	A
3ip2	A
3ir8	A, B
3k1k	A, B
3kcs	A
3kct	A
3la1	A
3lf3	A
3lf4	A, B
3ls3	A, B, C, D
3lsa	A, B, C, D
3lva	A, B
3lvc	A, B
3lvd	A, B
3m22	A, B, C, D
3m24	A, B, C, D
3mgf	A, B, C, D
3miq	A, B, C, D
3ned	A
3nez	A, B, C, D
3nf0	A
3nt3	A, B, C, D
3nt9	A, B, C, D
3o77	A
3o78	A, B
3ogo	A, B, C, D
3osq	A
3osr	A, B
3p8u	A, B, C, D
3pib	A, B, C, D
3pj5	A, B
3pj7	A, B, C, D
3pjb	A, B
3rwa	A, B, C, D,...
3rwt	A, B, C, D,...
3s05	A, B, C, D
3sg2	A
3sg3	A
3sg4	A
3sg5	A
3sg6	A
3sg7	A
3sry	A
3ss0	A
3ssh	A
3ssk	A
3ssl	A
3ssp	A
3sst	A
3ssv	A
3ssy	A
3st0	A
3st2	A, B, C
3st3	A, B, C
3st4	A, B, C
3sv5	A
3svb	A
3svc	A
3svd	A
3sve	A
3svn	A, B, C, D
3svo	A, B, C, D
3svr	A, B, C, D
3svs	A, B, C, D,...
3svu	A, B, C, D
3t6h	A, B, C, D
3tmr	A, B, C, D
3tmt	A, B, C, D
3u0k	A, B
3u0l	A
3u0m	A
3u0n	A
3u8a	A, B, C, D
3u8c	A, B, C, D

PDB	Chains	3did
3ufz	A
3ug0	A
3v3d	A
3vht	A, B
3vic	A, B, C, D,...
3vk1	A
3w1c	A
3w1d	A
3wck	A, B, C, D,...
3wlc	A
3wld	A
3ztf	A
3zuf	A, B, C, D,...
3zuj	A, B, C, D,...
3zul	A, B, C, D,...
4anj	A
4ar7	A
4as8	A
4b30	A, B
4b5y	A
4bdu	A, B, C, D
4dkm	A, B, C, D,...
4dkn	A, B
4dxi	A, B, C, D
4dxm	A, B, C, D
4dxn	A
4dxo	A
4dxp	A
4dxq	A
4edo	A, B
4eds	A, B
4emq	A, B, C, D,...
4en1	A, B
4eul	A
4ges	B
4gf6	B
4gob	A, B, C, D
4h3l	A, B
4h3m	A, B
4h3n	A
4h47	A
4h48	A
4hq8	A, B, C, D,...
4hq9	A, B, C, D,...
4hqc	A, B, C, D,...
4hvf	A, B, C
4i2y	A, B
4ik1	A
4ik3	A
4ik4	A
4ik5	A
4ik8	A
4ik9	A
4izn	A, B, C, D,...
4j88	A, B
4j89	A, B
4j8a	A
4jc2	A, B, C, D,...
4jeo	A, B
4jf9	A, B
4jfg	A, B, C, D,...
4jge	A, B
4jrb	A
4ka9	A
4kag	A
4kex	A
4kf4	A, B, C, D,...
4kf5	A, B, C, D
4kge	A, B
4kgf	A, B
4kpi	A
4kw4	A
4kw8	A
4kw9	A
4l12	A
4l13	A
4l1i	A
4ljb	A, B, C, D
4ljc	A, B, C, D
4ljd	A, B, C, D
4lqt	A
4lqu	A, B, C, D
4lw5	A, B, C, D,...
4n3d	A, B
4ndj	A
4ndk	A, B
4nws	A, B
4ogs	A, B
4ohs	A, B, C, D,...
4oj0	A, B, C, D
4oqw	A, B, C, D,...
4orn	A, B
4oy4	A
4p1q	A
4p76	A, B
4p7h	A, B
4pa0	A
4pfe	A, B
4ppj	A, B, C, D
4ppk	A, B, C, D
4ppl	A, B, C, D
4q7r	A, B
4q7t	A, B
4q7u	A
4q9w	A, B
4q9x	A
4r6b	A, B, C, D
4r6d	A
4rtc	A
4rys	A
4ryw	A, B, C
4tza	A, B, C, D
4tzg	A, B, C, D,...
4u2v	A, B, C, D
4uts	A, B, C, D
4w69	A, B
4w6a	A, B
4w6b	A, B
4w6c	A, B
4w6d	A, B
4w6f	A, B
4w6g	A, B
4w6h	A, B
4w6i	A, B
4w6j	A, B
4w6l	A
4w6m	A, B, C, D
4w6n	B, C, D, E,...
4w6o	A
4w6p	A, B, C, D,...
4w6r	A, C, E, H,...
4w6s	A, B
4w6t	A
4w6u	A, B, C, D
4w72	A, B
4w73	A, B
4w74	A, B, C, D,...
4w75	A, B
4w76	A, B
4w77	A, B
4w7a	A, B, C, D
4w7c	A, B, C, D
4w7d	A, B
4w7e	A
4w7f	A
4w7r	A, B, C, D
4w7x	A, B, C, D
4xbi	A, B
4xgy	A
4xl5	A
4xov	A
4xow	A
4xvp	A, B, C
4z4k	A, B
4z4m	A, B
4zb1	A, B
4zbl	A
4zfs	A, B, C, D,...
4zin	A, B, C
4zio	A, B, C
5aqb	B
5b61	A, B, C, D,...
5bql	A, B, C, D
5bt0	A, B
5btt	A, B
5dpg	A
5dph	A, B
5dpi	A, B, C, D,...
5dpj	A, B, C, D
5dqb	A
5dqm	A
5drf	A
5drg	A
5dtl	A, B, C, D,...
5dtx	A
5dty	A
5dtz	A, B, C, D
5du0	A, B, C, D
5dy6	A, B
5eb6	A
5eb7	A
5ebj	A
5ehu	A, B
5eju	A
5exb	A, B, C, D,...
5exc	A, B, C, D,...
5exu	A
5f9g	A
5fgu	A
5fhv	A
5fvf	A, B, C, D
5fvg	A, B, C, D
5fvi	A, B, C, D
5h87	A, B, C, D
5h88	A, B, C, D
5h89	A, B, C, D
5hbd	A
5hge	A
5hw9	A
5hzo	A, B
5hzs	A, B, C, D,...
5hzt	A, B, C, D,...
5hzu	A, B, C, D,...
5j2o	A
5j3n	A, B
5jva	A, B, C, D
5jzk	A, B
5jzl	A, B
5ktg	A, B
5lel	C, F, I
5lem	C
5lk4	A
5ltp	A, B, C, D,...
5ltq	A, B, C, D,...
5ltr	A
5ma3	B
5ma4	B
5ma5	B, D
5ma6	A
5ma8	B, D
5ma9	B, D, F, H
5mad	B, D, F, H
5mak	B, D
5mfc	B, D
5mse	A, B, C, D
5n9o	A
5nhn	A, B
5ni3	A, B, C, D
5o8b	A
5ooz	A
5oq9	A
5oqa	A
5oqe	A
5ox8	A
5ox9	A
5oxa	A
5oxb	A
5oxc	A
5t3i	A
5ukg	A, B
5wj2	A, B
5wj3	A, B
5wj4	A, B
5wts	A
5wwk	A, B, C, D,...
5y00	A
5y01	A
5y8q	A, B
5y8r	A
5yr2	A, B
5yr3	A
5yt1	A, B, C, D
5z6y	A
6aa2	A, B, C
6aa6	A, B
6aa7	A, B
6as9	A
6b0b	D, H
6b7r	A, B
6b7t	A, B
6b9c	A
6bbo	D, H
6ciu	A, B, C, D
6d38	A
6d39	A
6dej	A, B, C, D
6dgv	A
6dq0	A, B
6dq1	A
6efr	A
6fll	A
6fp7	A
6fp8	A
6fww	A
6gel	A, B
6gez	A, B
6go8	A
6go9	A
6goy	A
6goz	A
6gp0	A
6gp1	A, B
6gqg	A
6gqh	A
6grm	A
6h01	A, B, C, D
6hr1	A, B
6hut	A
6ir1	A
6ir2	A
6ir6	A
6ir7	A
6itc	G
6j1a	A
6j1b	A
6j1c	A
6jc5	A, B, C, D,...
6jc6	A, B, C, D,...
6jgh	A
6jgi	A
6jgj	A
6jxf	A
6kkz	A
6kl0	A
6kl1	A
6krg	A
6l02	A
6l26	A
6l27	A
6lof	A, B, C, D
6lr7	A
6lz2	A, C
6m63	A, B
6m9x	A, B, C, D
6m9y	B, D
6m9z	A, D
6mas	A, B, C, D,...
6mb2	a, b, c, d,...
6mdr	a, b, c, d,...
6mwq	G, H, I, J
6mxw	A, B, C, D,...
6myb	A, B, C, D,...
6myc	A, B, C, D,...
6mz3	A
6nhv	A

PDB	Chains	3did
6nqj	A, B, C, D
6nqk	A, B, C, D,...
6nql	A, B, C, D,...
6nqn	A, B, C, D,...
6nqo	A, B, C, D,...
6nqp	A, B, C, D,...
6nqq	A, B, C, D,...
6nqr	A, B, C, D,...
6nqs	A, B, C, D,...
6nqv	A, B, C, D,...
6oa8	A
6ofo	A, B
6per	A
6pfr	A
6pfs	A
6pft	A
6pfu	A
6qq8	A
6qq9	A
6qqa	A
6qqb	A
6qsl	A
6qsm	A
6qso	A
6quh	B, E
6qui	B, E
6quj	B, E
6s68	A
6sm0	A
6t39	A
6t3a	A
6tv7	A
6u1a	A
6uhj	A
6uhk	A, B
6uhl	A, B
6uhm	A, B
6uhn	A, B
6uho	A, B
6uhp	A, B
6uhq	A
6uhr	A, B
6un4	A
6uru	A, B
6vio	A, B, C, D,...
6wem	A, B, C, D
6wv3	A
6wv4	A
6wv5	A
6wv6	A
6wv7	A, B
6wv8	A
6wv9	A
6wva	A
6wvb	A
6wvd	A
6wve	A
6wvf	A
6wvg	A, B
6wvh	A, B
6wvi	A
6wzn	A
6xu4	A, B
6xwy	A, B, C, D
6xzf	A
6y1g	A, B, C, D
6ya9	A
6ylm	A
6yln	A
6ylo	A
6ylp	A
6ylq	A
6yls	A
6zqo	A
6zsm	A
6zsn	A
6zui	A
7a7k	A
7a7l	A
7a7m	A
7a7n	A
7a7o	A
7a7p	A
7a7q	A
7a7r	A
7a7s	A
7a7t	A
7a7u	A
7a7v	A
7a7w	A
7a7x	A
7a7y	A
7a7z	A
7a80	A, B, C, D
7a81	A
7a82	A
7a83	A
7a84	A
7a85	A
7a86	A, B
7a87	A
7a88	A
7a89	A, B
7a8a	A
7a8b	A
7a8c	A
7a8d	A
7a8e	A
7a8f	A
7a8g	A, B
7a8h	A, B, C, D
7a8i	A, B, C, D
7a8j	A
7a8k	A
7a8l	A
7a8m	A
7a8n	A
7a8o	A
7amb	A, B, C, D
7amf	A, B, C, D
7amu	A
7aug	A
7bhg	A, B
7bwn	A, C, E, F,...
7c03	A
7cao	A
7cd7	B, D
7cd8	B
7cz0	A, B, C, D
7dig	A, B, C, D,...
7dmx	A, B, C, D
7dna	A, B, D, F,...
7dnb	A, B, C, D
7e53	A
7e9y	A
7km4	A
7lg4	A
7lqo	A
7lug	A
7o7c	A
7o7d	A
7o7e	A
7o7h	A
7o7u	A
7o7v	A
7o7w	A
7o7x	A
7oin	B
7pca	A
7pcz	A, B
7pd0	A, B, C, D
7pnn	A
7q6b	A
7qgk	A
7qli	A
7qlj	A
7qlk	A
7qll	A
7qlm	A
7qln	A
7qlo	A
7rha	A, B
7rhb	A, B
7rhc	A, B
7rhd	A
7rrh	A, B, C, D,...
7rri	A, B, C, D,...
7rrj	A, B, C, D,...
7rrk	A, B, C, D,...
7ry2	A, B, C, D,...
7s7t	A
7s7u	A
7s7v	A, B, C, D
7sah	A
7sai	A
7saj	A, C, E, G,...
7sak	A
7sal	A, B
7sf9	A, B, C, D
7sfa	A, B, C, D
7st4	A
7swr	A
7sws	A, B, C, D,...
7swt	A, B, C, D
7swu	A, B, C, D
7tsr	A
7tss	A
7tsu	A
7tsv	A
7ugr	A
7ugs	A
7ugt	A
7vcm	A, B
7x2b	A
7y40	A, B
7y96	A, B
7yao	A, B
7ydq	A
7yeu	A
7yre	A, B, C, D
7yv3	A
7yv5	A
7z7o	A, B, C, D
7z7p	A, B, C, D,...
7z7q	A, B, C, D
7zct	A, B
8a6g	A
8a6n	A
8a6o	A
8a6p	A
8a6q	A
8a6r	A
8a6s	A
8a7v	A
8a83	A
8aab	A
8aha	A
8ahb	A
8am4	A
8arm	A
8b2y	A, B, C, D
8b65	A
8b6s	A, B
8b6t	A, B
8b7g	A
8ban	A, B
8bav	A, B
8bbj	A, B
8bgl	A, B
8bvg	A, B, C, D,...
8bxp	A, B
8bxt	A, B
8c0n	A, B, C, D
8c1x	A, B, C, D
8c7i	A
8dhr	A, B
8dhy	A
8dj8	A
8dpd	A
8dta	A
8g0i	A
8g4e	B
8gos	A, B
8gyf	A, B
8hco	G
8hgi	A, B
8i4j	A, B, C, D
8i4k	A, B, C, D,...
8i4o	A, C, E, G,...
8ilk	A, B
8ill	A, B
8ilx	A, B
8im0	A
8im1	A, C, E, G
8iyy	A
8iyz	A
8iz0	A
8iz1	A
8iz2	A
8iz3	A
8j2h	A, B
8j2i	A, B
8j2j	A, B
8j2k	A, B
8j2l	A, B
8j3j	A, B
8jkc	A, B, C, D
8jkg	A, B, C, D
8jki	A, B, C, D
8jl2	A, B, C, D
8jl5	A, B, C, D
8jl6	A, B, C, D
8jl7	A, B
8jll	A, B, C, D
8jlm	A
8jls	A
8jlt	A, B
8jlu	A, B, C, D
8ovn	A
8ovo	A, B
8ovp	A, B
8ovy	A, B
8pei	A, B
8q6w	A
8q79	A, B
8qbj	A, C
8qdd	A, C
8qwj	A
8sfs	A, B
8sfv	A
8sfx	A, B
8sfz	D, E, F
8sg3	A
8slc	A, B
8sxc	A
8ths	A, B, C, D
8tjh	A, B
8u20	A, B
8u21	A
8u22	A
8u23	A, B, C, D,...
8u24	A
8ub6	A
8uqq	A
8wgp	A, B
8xc6	A, B
8xh0	A
8xh1	A, B
8xh2	A, B
8xld	A
8ydo	A, B, C, D
8yq4	A, B
8zbo	A, C
8zup	A
8zuq	A
8zur	A
8zus	A
8zut	A
9bcf	A, B, C
9bq4	A, B, C, D
9c74	A
9f22	A
9f24	A
9k8w	A
9k8x	A

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