3did - Results

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Domain JAB (Pfam: PF01398.26

)

GO terms

F	GO:0005515	Protein binding

F	GO:0008233	Peptidase activity

F	GO:0008237	Metallopeptidase activity

Default colors
Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

Default color scheme

Interacting domains (21 domains)

BRCC36_C

CSN4_RPN5_eIF3a

CSN4_RPN5_eIF3a

CSN5_C

Cullin_Nedd8

JAB

MPN_2A_DUB_like

MPN_2A_DUB_like

MitMem_reg

PC_rep

PITH

PROCT

PRP8_domainIV

PRS7_OB

PSD13_N

Prot_ATP_ID_OB_C

Prot_ATP_ID_OB_C

RPN5_C

Sec63

TSSC4

V-set

VWA_2

eIF3h_C

ubiquitin

HMM profile interface residues in JAB (23 interfaces)

HMM prof. interface res.	Binding partner(s)
	JAB PROCT
	eIF3h_C MitMem_reg
	PC_rep Prot_ATP_ID_OB_C V-set
	CSN4_RPN5_eIF3a JAB
	JAB MitMem_reg TSSC4
	JAB MPN_2A_DUB_like Prot_ATP_ID_OB_C
	Sec63
	BRCC36_C JAB
	MitMem_reg
	V-set
	Prot_ATP_ID_OB_C
	CSN5_C
	PRP8_domainIV RPN5_C
	PITH ubiquitin
	PITH ubiquitin VWA_2
	Cullin_Nedd8 PRS7_OB RPN5_C
	JAB Prot_ATP_ID_OB_C
	JAB ubiquitin VWA_2
	Cullin_Nedd8
	ubiquitin VWA_2
	MPN_2A_DUB_like
	RPN5_C ubiquitin
	JAB PSD13_N

PDB entries that contain the JAB domain (136 structures)

PDB	Chains	3did
2o95	A, B
2o96	A, B
2p87	A
2p8r	A
2znr	A
2znv	A, D
3j7j	F, H
3j7k	F, H
3j8b	F, H
3j8c	F, H
3jck	E, G
3rzu	A, B, C, D,...
3rzv	A
4b4t	U, V
4bgr	U, V
4c0v	U, V
4cr2	U, V
4cr3	U, V
4cr4	U, V
4d10	E, F, M, N
4d18	E, F, M, N
4e0q	A, B
4f7o	A, B
4jxe	A, B
4k1r	A, C
4kit	C
4ms7	A, B
4msd	A, B
4msj	A, B, C
4msm	A, C
4msq	A, C
4nql	A
4o8x	A, B
4o8y	A, B
4ocl	A, B, D, E
4ocm	A, B, D, E
4ocn	A, B, D, E
4owp	A, B
4pqt	A
4qft	A
4r14	A, B
4zd4	A, B
4zd5	A, B
4zfr	A
4zft	A, C
5a5b	U, V

PDB	Chains	3did
5a5t	F, H
5cw3	A, C
5cw4	A, C
5cw5	A, C
5cw6	A
5gjq	U, V
5jog	A
5joh	A
5l4k	U, V
5ln3	U, V
5m32	n, q
5m59	B, D, F, H
5m5q	A
5mpd	U, V
5mpe	U, V
5o9z	A
5t0g	c, Z
5t0h	c, Z
5t0i	c, Z
5t0j	c, Z
5u4p	A, B
5vfr	c, Z
5vft	c, Z
5vgz	c, Z
5vhf	c, Z
5vhh	c, Z
5vhi	c, Z
5vhs	c, Z
5w83	A, B
5z58	A
6ah0	A
6ef3	r
6epc	U, V
6epd	U, V
6epe	U, V
6epf	U, V
6ff4	A
6ff7	A
6fju	A, B
6fjv	A
6fnn	A, B
6fno	A, B
6gvw	B, G
6h3c	B, G
6icz	A

PDB	Chains	3did
6r6h	E, F
6r7f	E, F
6r7h	E, F
6r7i	E, F
6r8f	A, C
6s8q	J
6s9i	J
6wjn	c, Z
6ybd	4, 8
7a5p	A
7abi	A
7bdi	J
7bdj	J
7bdk	J
7bdl	J
7dvq	A
7l97	A
7lm3	A, B
7os2	J
7px3	J
7qo3	U, V
7qvg	U, V
7qy7	c, Z
8amz	U, V
8bc8	J
8bc9	J
8bca	J
8bcb	J
8bcc	J
8bcd	J
8bce	J
8bcf	J
8bcg	J
8h38	E, F
8h3a	E, F
8h3f	E, F
8jri	c, Z
8jti	c, Z
8q7n	A
8qp8	A
8rc0	A
8rg0	4, 8
9e8j	c, Z
9e8l	c, Z
9e8n	c, Z