3did - Results

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Domain KH_1 (Pfam: PF00013.34

)

GO terms

F	GO:0003723	RNA binding

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Domains are in orange, motifs in green.

Molecular function color scheme
Colored dots identify domains annotated with the corresponding GO term of Molecular function.

Cellular component color scheme
Colored dots identify domains annotated with the corresponding GO term of Cellular component.

Biological process color scheme
Colored dots identify domains annotated with the corresponding GO term of Biological process.

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Interacting domains (7 domains)

KH_1

Qua1

RNase_PH

RNase_PH_C

RRP4_S1

STAR_dimer

HMM profile interface residues in KH_1 (16 interfaces)

HMM prof. interface res.	Binding partner(s)
	KH_1
	KH_1
	RNase_PH
	RNase_PH_C
	Qua1
	KH_1 RRP4_S1
	KH_1 S1
	S1
	KH_1
	KH_1 STAR_dimer
	KH_1 RNase_PH
	KH_1 RNase_PH
	KH_1
	KH_1
	Qua1
	KH_1 S1

PDB entries that contain the KH_1 domain (88 structures)

PDB	Chains	3did
1dt4	A
1dtj	A, B, C, D
1ec6	A, B
1j4w	A
1j5k	A
1khm	A
1tua	A
1vig	A
1vih	A
1we8	A
1wvn	A
1x4m	A
1x4n	A
1ztg	A, B, C, D
1zzi	A, B
1zzj	A, B, C
1zzk	A
2ann	A
2anr	A
2axy	A, B, C, D
2bl5	A
2cpq	A
2cte	A
2ctf	A
2ctj	A
2ctk	A
2ctl	A
2ctm	A
2dgr	A
2e3u	A

PDB	Chains	3did
2fmr	A
2hh2	A
2hh3	A
2jvz	A
2jzx	A
2mjh	A
2n8l	A
2n8m	A
2opu	A
2opv	A
2p2r	A
2pqu	A, B, C, D
2py9	A, B, C, D
2qnd	A, B
3aev	B
3krm	A, B, C
3u1k	A, B, C, D
3vke	A, B, C, D
4aim	A
4am3	A, B, C
4b8t	A
4jvh	A
4jvy	A, B
4lij	A, B, C
4nbq	A, B, C
4wal	A
4wan	A, C, E, G
5elr	C, D
5els	A, B, C, D,...

PDB	Chains	3did
5elt	A, B
5emo	A, B
5www	A
5wwx	A
5wwz	A, B, C
5zf6	A
6fbl	A
6gqe	A
6gy4	A, B, C, D
6qey	A
6qh2	A
6rol	A, B, C, D
6y24	A
6y2c	A, B
6y2d	A, B, C, D
7cre	A
7ogk	A, B, C
7ogl	A, B, C
7ogm	L, N, O
7vkl	A
7vpx	D
7ww3	A
7yey	A
8coo	A
8tuk	A
8vah	A, B, C
8vak	A, B, C
8wxf	A, B, C
8xie	G, H, I